The detailed information of tRNA gene sequence


Sequence ID>WENV170688141
Genome IDLFRM01229732
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 746
End posion on genome 821
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
gtatatgtat
tRNA gene sequence 
GCCTCTGTAGCTCAGTCGGTAGAGCAGGGGACTGAAAATCCCCGTGTCGGTGGTTCGATT
CCGCCCGGAGGCACCA
Downstream region at tRNA end position 
tttggagatt
Secondary structure (Cloverleaf model)
>WENV170688141	Phe	GAA
                   t      ACCA tttggagatt
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     T + G
                     G - C          T T
                    T     C C G C C     A
      T G A        A      | | + | |     G
    C       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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