The detailed information of tRNA gene sequence


Sequence ID>WENV170688142
Genome IDLFRM01229732
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 835
End posion on genome 910
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ggagattgac
tRNA gene sequence 
GCTGGTGTAGCTCAATCGGCAGAGCAGCTGATTTGTAATCAGCAGGTTGCGGGTTCAAGT
CCCATCACCAGCTCCA
Downstream region at tRNA end position 
tgacttggag
Secondary structure (Cloverleaf model)
>WENV170688142	Thr	TGT
                   c      TCCA tgacttggag
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T A C C C     A
      T A A        A      +   | | |     A
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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