The detailed information of tRNA gene sequence


Sequence ID>WENV170688162
Genome IDLFRM01231417
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2384
End posion on genome 2308
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aagcgtaatt
tRNA gene sequence 
GGGTCTGTAGCTCAGCTGGTTAGAGCACCGTGTTGATAACGCGGGGGTCAGTGGTTCAAG
TCCACTTAGACCCACCA
Downstream region at tRNA end position 
ttttacatgg
Secondary structure (Cloverleaf model)
>WENV170688162	Ile	GAT
                   t      ACCA ttttacatgg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G + T          T G
                    T     T C A C C     A
      C G A        A      | | | | |     A
    T       C T C G       A G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    G - C
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK