The detailed information of tRNA gene sequence


Sequence ID>WENV170688180
Genome IDLFRM01232449
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3302
End posion on genome 3229
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
gtagctcttg
tRNA gene sequence 
GCGGGTATAGTTCAACGGTAGAACCTCAGCCTTCCAAGCTGATGGTGCGGGTTCGATTCC
CGCTACCCGCTCCA
Downstream region at tRNA end position 
gtccggtaat
Secondary structure (Cloverleaf model)
>WENV170688180	Gly	TCC
                   g      TCCA gtccggtaat
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T T
                    T     C G C C C     A
        A A        A      | | | | |     G
      C     C T T G       G C G G G     C
      G     | | | |                 T T
      G     G A A C
        T A        C     TGGT
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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