The detailed information of tRNA gene sequence


Sequence ID>WENV170688240
Genome IDLFRM01235144
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3095
End posion on genome 3019
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
caccaccagt
tRNA gene sequence 
GGCCCGGTAGTTCAGATGGTTAGAATGCCAGCCTGTCACGCTGGAGGTCGAGGGTTCGAG
TCCCTTCCGGGTCGCCA
Downstream region at tRNA end position 
gatgagaggt
Secondary structure (Cloverleaf model)
>WENV170688240	Asp	GTC
                   t      GCCA gatgagaggt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T T C C C     A
      A G A        A      + | | | |     G
    T       C T T G       G A G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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