The detailed information of tRNA gene sequence


Sequence ID>WENV170688241
Genome IDLFRM01235144
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2916
End posion on genome 2841
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
catcccaaat
tRNA gene sequence 
GCCCAGGTAGCTCAGTAGGTAGAGCAGAGGACTGAAAATCCTCGTGTCGGTGGTTCGATT
CCGCCCCTGGGCACCA
Downstream region at tRNA end position 
ggaaaaatgg
Secondary structure (Cloverleaf model)
>WENV170688241	Phe	GAA
                   t      ACCA ggaaaaatgg
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          T T
                    T     C C G C C     A
      T G A        A      | | + | |     G
    A       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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