The detailed information of tRNA gene sequence


Sequence ID>WENV170688247
Genome IDLFRM01235490
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 89
End posion on genome 3
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
aatttagcct
tRNA gene sequence 
GCCACTGTGTTGGAACTGGTAGACAAACTTGACTCAAAATCAAGCGCCTTCACGGGCGTG
CCGGTTCGAATCCGGCCAGTGGCACCA
Downstream region at tRNA end position 
ttnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170688247	Leu	CAA
                   t      ACCA ttnnnnnnnn
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     T - A
                     G - C          T A
                    T     C G G C C     A
      C A A        G      | | | | |     G
    T       G G T T       G C C G G     C
    G         | | |                 T T
    G       A C A A
      T A G        A     CGCCTTCACGGGCGT
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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