The detailed information of tRNA gene sequence


Sequence ID>WENV170688257
Genome IDLFRM01236266
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 217
End posion on genome 292
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
cccgcagttt
tRNA gene sequence 
GCGGATGTAGCTCATCTGGTAGAGCGCCACCTTGCCAAGGTGGAGGTAGCGAGTTCGAGC
CTCGTCATCCGCTCCA
Downstream region at tRNA end position 
gaaaaaggtc
Secondary structure (Cloverleaf model)
>WENV170688257	Gly	GCC
                   t      TCCA gaaaaaggtc
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          C G
                    T     T G C T C     A
      C T A        A      + | | | |     G
    T       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTA
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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