The detailed information of tRNA gene sequence


Sequence ID>WENV170688260
Genome IDLFRM01236355
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 12212
End posion on genome 12137
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ctttgaaaga
tRNA gene sequence 
GGCCCGTTGGAGAAGCGGTCAACTCATAGCCCTCTCAAGGCTACATGCACGGGTTCGAAT
CCCGTACGGGTCACCA
Downstream region at tRNA end position 
gtggattatg
Secondary structure (Cloverleaf model)
>WENV170688260	Glu	CTC
                   a      ACCA gtggattatg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T G C C C     A
      C G A        G      | | | | |     G
    G       A G A G       A C G G G     C
    G         | | |                 T T
    T       A C T C
      C A          A     CATGC
                    T - A
                    A - T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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