The detailed information of tRNA gene sequence


Sequence ID>WENV170688261
Genome IDLFRM01236380
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 296
End posion on genome 373
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cccatcgtca
tRNA gene sequence 
CGGGATGTAGCGCAGCCTGGTTAGCGCACCTGCTTTGGGAGCAGGGGGTCGTCGGTTCGA
ATCCGACTATCCCGACCA
Downstream region at tRNA end position 
ttaaaaacaa
Secondary structure (Cloverleaf model)
>WENV170688261	Pro	TGG
                   a      ACCA ttaaaaacaa
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G + T          T A
                    T     C A G C C     A
    C C G A        A      | | | | |     G
  T         C G C G       G T C G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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