The detailed information of tRNA gene sequence


Sequence ID>WENV170688271
Genome IDLFRM01236969
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 82
End posion on genome 166
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tccatgatct
tRNA gene sequence 
GGAGGGATTCCCGAGTGGCCAAAGGGGGCAGACTGTAAATCTGTTGTCGCTGACTTCGAT
GGTTCGAATCCATCTCCCTCCACCA
Downstream region at tRNA end position 
taagaggctg
Secondary structure (Cloverleaf model)
>WENV170688271	Tyr	GTA
                   t      ACCA taagaggctg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T A C C     A
      T G A        T      | | | | |     G
    G       G C C C       G A T G G     C
    G         | | |                 T T
    C       A G G G
      C A A        G     TGTCGCTGACTTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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