The detailed information of tRNA gene sequence


Sequence ID>WENV170688307
Genome IDLFRM01238856
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1593
End posion on genome 1670
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
agccacgttt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTTAGCGCGCCTGCCTTGGGAGCAGGAGGTCGGAGGTTCGA
ATCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
gcatttccca
Secondary structure (Cloverleaf model)
>WENV170688307	Pro	TGG
                   t      ACCA gcatttccca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
    C C G A        A      + | | | |     G
  T         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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