The detailed information of tRNA gene sequence


Sequence ID>WENV170688311
Genome IDLFRM01239035
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 287
End posion on genome 199
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ctgagtgctg
tRNA gene sequence 
GCCGGGCTGGCGGAATAGGTAGACGCACGGGACTTAAAATCCTGGGGACAGAAAAGTCCG
TGCGGGTTCGAGTCCCGCGTCCGGCACCA
Downstream region at tRNA end position 
caatgtactt
Secondary structure (Cloverleaf model)
>WENV170688311	Leu	TAA
                   g      ACCA caatgtactt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G + T
                     C - G          T G
                    T     C G C C C     A
      T A A        G      | | | | |     G
    A       G G C G       G C G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     GGGACAGAAAAGTCCGT
                    C - G
                    G + T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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