The detailed information of tRNA gene sequence


Sequence ID>WENV170688315
Genome IDLFRM01239282
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 946
End posion on genome 1031
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
caattactat
tRNA gene sequence 
GCAGGGGAGCCCGAGCGGCCAAAGGGGGAGGACTTAAGATCCTCTGGCGCAGGCCTTCGA
GGGTTCGAATCCCTTCCCCTGCACTA
Downstream region at tRNA end position 
tgaatttcaa
Secondary structure (Cloverleaf model)
>WENV170688315	Leu	TAA
                   t      ACTA tgaatttcaa
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    A     T T C C C     A
      C G A        G      + | | | |     G
    G       G C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      C A A        G     TGGCGCAGGCCTTC
                    G - C
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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