The detailed information of tRNA gene sequence


Sequence ID>WENV170688316
Genome IDLFRM01239282
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1064
End posion on genome 1136
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
aaaatacagt
tRNA gene sequence 
GCCTTAGTGGCTCAGGTGGTAGAGCGATGCCTTGGTAAGGCATAGGTCGCGGGTTCGAAT
CCCGCCTAAGGCTttt
Downstream region at tRNA end position 
cattgatttt
Secondary structure (Cloverleaf model)
>WENV170688316	Thr	GGT
                   t      Tttt cattgatttt
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A
                     A - T
                     G - C          T A
                    T     C G C C C     A
      G G A        G      | | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    T - A
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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