The detailed information of tRNA gene sequence


Sequence ID>WENV170688322
Genome IDLFRM01239713
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 40637
End posion on genome 40727
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ataaagtttt
tRNA gene sequence 
GGAGAGGTGTCCGAGCTGGTTGAAGGAGCTCGCCTGGAAAGCGGGTATTGGGGAAACTCA
ATCATGGGTTCGAATCCCATTCTCTCCGCCA
Downstream region at tRNA end position 
tttccgtgct
Secondary structure (Cloverleaf model)
>WENV170688322	Ser	GGA
                   t      GCCA tttccgtgct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T A C C C     A
    T C G A        G      | | | | |     G
  G         G C C T       A T G G G     C
  G           | | |                 T T
  T         A G G A
    T G A          G     TATTGGGGAAACTCAATC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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