The detailed information of tRNA gene sequence


Sequence ID>WENV170688355
Genome IDLFRM01241137
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1065
End posion on genome 1155
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcctgaacaa
tRNA gene sequence 
GGTGGCGTGTCCGAGCGGCCGAAGGTGATCGCCTCGAAAGCGATTGTTGGGTAACCCCCA
ACCGAGGGTTCAAATCCCTCCGCCACCGCCG
Downstream region at tRNA end position 
gctgaaggcc
Secondary structure (Cloverleaf model)
>WENV170688355	Ser	CGA
                   a      GCCG gctgaaggcc
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G A G G G     C
    G         | |                   T T
    C       A G G T
      C G A        G     TGTTGGGTAACCCCCAACC
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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