The detailed information of tRNA gene sequence


Sequence ID>WENV170688356
Genome IDLFRM01241174
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1623
End posion on genome 1695
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
taaggcagtt
tRNA gene sequence 
GCCGCTGTGGCTTAGTGGTATAGCGGCTGATTCGTAATCAGCAGGTCGGGGGTTCAAATC
CCTCCAGCGGCTCtc
Downstream region at tRNA end position 
aaacgtcacg
Secondary structure (Cloverleaf model)
>WENV170688356	Thr	CGT
                   t      TCtc aaacgtcacg
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     C T C C C     A
        G A        G      | + | | |     A
      T     T T C G       G G G G G     C
      G       | | |                 T T
      G     T A G C
        T A        G     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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