The detailed information of tRNA gene sequence


Sequence ID>WENV170688358
Genome IDLFRM01241259
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 470
End posion on genome 542
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
agttttattt
tRNA gene sequence 
GCCCTTGTAGCTCAGCCGGCAGAGCACCACCATGGTAAGGTGGGGGTCATCGGTTCGAAT
CCGATCGAGGGCTtaa
Downstream region at tRNA end position 
tttttgttta
Secondary structure (Cloverleaf model)
>WENV170688358	Thr	GGT
                   t      Ttaa tttttgttta
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     T + G
                     G - C          T A
                    T     T A G C C     A
      C G A        A      | | | | |     G
    C       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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