The detailed information of tRNA gene sequence


Sequence ID>WENV170688365
Genome IDLFRM01241570
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 17
End posion on genome 93
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
acgtaaaaat
tRNA gene sequence 
CGGGATGTAGCACAGTTGGCTAGCGCGCCACGTTCGGGACGTGGAGGTCGGGTGTTCGAG
TCACCTCATCCCGACAA
Downstream region at tRNA end position 
agataaaaag
Secondary structure (Cloverleaf model)
>WENV170688365	Pro	CGG
                   t      ACAA agataaaaag
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T C C A C     A
      T G A        A      + | | | |     G
    T       C A C G       G G G T G     C
    G       |   | |                 T T
    G       G C G C
      C T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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