The detailed information of tRNA gene sequence


Sequence ID>WENV170688417
Genome IDLFRM01243955
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1874
End posion on genome 1799
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
cattttttag
tRNA gene sequence 
GGGCCCGTAGTCTAGCCTGGAATATGACGTGGGACTTCGGATCCCAAGGTCGGGGGTTCA
AATCCCCCCGGGTCCGtta
Downstream region at tRNA end position 
tcgttatgaa
Secondary structure (Cloverleaf model)
>WENV170688417	Arg	TCG
                   g      Gtta tcgttatgaa
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C C C C C     A
    C C G A        A      | | | | |     A
  T         T C T G       G G G G G     C
  G           | | |                 T T
  G         T G A C
    A A T A        G     AGGTC
                    T - A
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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