The detailed information of tRNA gene sequence


Sequence ID>WENV170688432
Genome IDLFRM01245213
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1396
End posion on genome 1483
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcttcgacgc
tRNA gene sequence 
GGAGGATTCGCCTAGCGGCCTATGGCGCTCGCCTGGAACGCGAGTTGGGAGCAATCCCTC
AGGGGTTCAAATCCCCTATCCTCCGCCA
Downstream region at tRNA end position 
aagagaaccc
Secondary structure (Cloverleaf model)
>WENV170688432	Ser	GGA
                   c      GCCA aagagaaccc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T C C C C     A
      C G A        C      | | | | |     A
    G       T C C G       A G G G G     C
    G         | | |                 T T
    C       T G G C
      C T A        G     TTGGGAGCAATCCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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