The detailed information of tRNA gene sequence


Sequence ID>WENV170688434
Genome IDLFRM01245215
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1370
End posion on genome 1460
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgccattccc
tRNA gene sequence 
GGAGGGTTGGCAGAGCTGGTTGATTGCACCGGTCTTGAAAACCGGCATACCTTCACGGGT
ATCTGGGGTTCGAATCCCTAACCCTCCGCCA
Downstream region at tRNA end position 
ttttatcatt
Secondary structure (Cloverleaf model)
>WENV170688434	Ser	TGA
                   c      GCCA ttttatcatt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     A T C C C     A
    T C G A        G      | + | | |     G
  G         G A C G       T G G G G     C
  G         + | | |                 T T
  T         T T G C
    T G A          A     CATACCTTCACGGGTATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK