The detailed information of tRNA gene sequence


Sequence ID>WENV170688480
Genome IDLFRM01247800
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 466
End posion on genome 393
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
cagatgatat
tRNA gene sequence 
TGGGGAATGGTGCAACGGCAGCACGCCTGACTCTGGATCAGGTAATCCTGGTTCGAATCC
AGGTTCCCCAGCCA
Downstream region at tRNA end position 
gaaaacaagg
Secondary structure (Cloverleaf model)
>WENV170688480	Gln	CTG
                   t      GCCA gaaaacaagg
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     G G A C C     A
        A A        G      | | | | |     G
      C     C G T G       C C T G G     C
      G     | | | |                 T T
      G     G C A C
        C A        G     TAAT
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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