The detailed information of tRNA gene sequence


Sequence ID>WENV170688545
Genome IDLFRM01250322
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2749
End posion on genome 2665
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
gagtaacaaa
tRNA gene sequence 
GCGGACGTGGTGGAATTGGTAGACACACCAGATTTAGGTTCTGGCGCCGCGAGGTGTGAG
AGTTCGAGTCTCTCTGTCCGCACCA
Downstream region at tRNA end position 
tacaaaggct
Secondary structure (Cloverleaf model)
>WENV170688545	Leu	TAG
                   a      ACCA tacaaaggct
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     C - G
                     G + T          T G
                    T     C T C T C     A
      T A A        G      | | | | |     G
    T       G G T G       G A G A G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     CGCCGCGAGGTGT
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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