The detailed information of tRNA gene sequence


Sequence ID>WENV170688563
Genome IDLFRM01251242
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2037
End posion on genome 1961
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
cactgtatct
tRNA gene sequence 
GCGCCAGTAGCTCAGTTGGATAGAGTGTTTGACTACGAATCAAAAGGTCGGGGGTTCGAA
TCCCTCCTGGCGTACCA
Downstream region at tRNA end position 
gtttcgctat
Secondary structure (Cloverleaf model)
>WENV170688563	Arg	ACG
                   t      ACCA gtttcgctat
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        G     AGGTC
                    T - A
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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