The detailed information of tRNA gene sequence


Sequence ID>WENV170688584
Genome IDLFRM01251423
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2691
End posion on genome 2616
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
agggctatac
tRNA gene sequence 
GGGGGTGTAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGCGGTTCGATC
CCGCTCATCTCCACCA
Downstream region at tRNA end position 
tcccccttcg
Secondary structure (Cloverleaf model)
>WENV170688584	Ala	TGC
                   c      ACCA tcccccttcg
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     G - C          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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