The detailed information of tRNA gene sequence


Sequence ID>WENV170688622
Genome IDLFRM01253971
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 54844
End posion on genome 54916
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttatgaggga
tRNA gene sequence 
GGGGCCATAGGGTAGCCTGGCATCCTAGGAGACTGGGGGTCTTCTGACCTGCGTTCAAAT
CGCGGTGGCCCCAtcg
Downstream region at tRNA end position 
taccattttt
Secondary structure (Cloverleaf model)
>WENV170688622	Pro	TGG
                   a      Atcg taccattttt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     G G C G C     A
      C G A        A      | + | | |     A
    C       T G G G       C T G C G     C
    T       | + | |                 T T
    G       A T C C
      G C          T     CTGAC
                    A - T
                    G + T
                    G - C
                    A - T
                    G   G
                  A       G
                  C       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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