The detailed information of tRNA gene sequence


Sequence ID>WENV170688690
Genome IDLFRM01258081
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 5860
End posion on genome 5778
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
ctgatttcaa
tRNA gene sequence 
GCGAGAGTGGCGGAACTGGCAGACGCACTGGACTTAGGATCCAGCGGGCAACCGTGGGGG
TTCGACTCCCCCCTCTCGCACCA
Downstream region at tRNA end position 
gatccatatc
Secondary structure (Cloverleaf model)
>WENV170688690	Leu	TAG
                   a      ACCA gatccatatc
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C          T C
                    T     C C C C C     A
      C A A        G      | | | | |     G
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        A     CGGGCAACCGT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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