The detailed information of tRNA gene sequence


Sequence ID>WENV170688700
Genome IDLFRM01258552
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 106228
End posion on genome 106153
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtggaaatac
tRNA gene sequence 
GCCCTGGTAGTGTAGCGGCCTATCATGAAGCCCTGTCGAGGCTCCGACTCGGGTTCAAAT
CCCGACCAGGGCGCCA
Downstream region at tRNA end position 
ttctcaattc
Secondary structure (Cloverleaf model)
>WENV170688700	Asp	GTC
                   c      GCCA ttctcaattc
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C
                     G - C          T A
                    T     A G C C C     A
      C G A        A      | | | | |     A
    G       T G T G       T C G G G     C
    G         | | +                 T T
    C       T C A T
      C T A        G     CGAC
                    A   C
                    A - T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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