The detailed information of tRNA gene sequence


Sequence ID>WENV170688701
Genome IDLFRM01258552
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 75307
End posion on genome 75221
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gagccaccag
tRNA gene sequence 
GCCGAGGTGGCCCAGACCGGTAAGGCGCAAGCCTGGAAAGCTTGTGTCCGCAAGGACTCG
TGAGTTCAAATCTCACCCTCGGCGCCA
Downstream region at tRNA end position 
tccttcttac
Secondary structure (Cloverleaf model)
>WENV170688701	Ser	GGA
                   g      GCCA tccttcttac
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C T C     A
      A G A        G      | | | | |     A
    C       C C C G       G T G A G     C
    C         | | |                 T T
    G       A G G C
      G T A        G     TGTCCGCAAGGACTC
                    C - G
                    A - T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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