The detailed information of tRNA gene sequence


Sequence ID>WENV170688707
Genome IDLFRM01258660
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1102
End posion on genome 1026
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tttgttgaaa
tRNA gene sequence 
CGGAACGTAGCGCAGACTGGTAGCGCACCTGAATGGGGTTCAGGGGGTCGGAGGTTCAAA
TCCTCTCGTTCCGACCA
Downstream region at tRNA end position 
aaatatacct
Secondary structure (Cloverleaf model)
>WENV170688707	Pro	GGG
                   a      ACCA aaatatacct
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     C - G
                     G - C          T A
                    T     T C T C C     A
      A G A        A      + | | | |     A
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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