The detailed information of tRNA gene sequence


Sequence ID>WENV170688787
Genome IDLFRM01261597
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 214
End posion on genome 290
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ctccatattt
tRNA gene sequence 
GTCCCAGTAGCTCAGCTGGATAGAGCAACGGACTTCTAATCCGTAGGTCAGGGGTTCGAA
TCCCTTCTGGGACGCCA
Downstream region at tRNA end position 
ggaatataaa
Secondary structure (Cloverleaf model)
>WENV170688787	Arg	TCT
                   t      GCCA ggaatataaa
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     T T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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