The detailed information of tRNA gene sequence


Sequence ID>WENV170688788
Genome IDLFRM01261621
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 6158
End posion on genome 6082
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgttttttt
tRNA gene sequence 
GGCGAGATAGCTCAGTTGGTTAGAGCGCATGATTCATAATCATGAGGTCCCGGGATCATG
CCCCGGTCTCGCTACAA
Downstream region at tRNA end position 
tttgaaacaa
Secondary structure (Cloverleaf model)
>WENV170688788	Met	CAT
                   t      ACAA tttgaaacaa
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          C G
                    T     G G C C C     T
      T G A        A      | | | | |     A
    T       C T C G       C C G G G     C
    G       | | | |                 A T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK