The detailed information of tRNA gene sequence


Sequence ID>WENV170688789
Genome IDLFRM01261633
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 29882
End posion on genome 29968
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgtggcccaa
tRNA gene sequence 
GCGGAGGTGGCCCAGCCTGGCAAGGCGCAGGATTGCTAATCCTGTGTCCGCAAGGACTCG
GGGGTTCAAATCCCCCCCTCCGCGCCA
Downstream region at tRNA end position 
ctttccaatc
Secondary structure (Cloverleaf model)
>WENV170688789	Ser	GCT
                   a      GCCA ctttccaatc
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     A
    C       C C C G       G G G G G     C
    T         | | |                 T T
    G       A G G C
      G C A        G     TGTCCGCAAGGACTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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