The detailed information of tRNA gene sequence


Sequence ID>WENV170688795
Genome IDLFRM01261889
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 29538
End posion on genome 29623
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tcagcaccaa
tRNA gene sequence 
GCGGGAGTAACCAAGCGGTCAACGGTGAACGACTCAAGATCGTTTCGCGCAGGCGTTCAG
GGGTTCGAATCCCTTCTCCCGCACTA
Downstream region at tRNA end position 
aaatattaaa
Secondary structure (Cloverleaf model)
>WENV170688795	Leu	CAA
                   a      ACTA aaatattaaa
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T T C C C     A
      C G A        A      | + | | |     G
    G       A C C A       A G G G G     C
    G         | | |                 T T
    T       C G G T
      C A A        G     TCGCGCAGGCGTTC
                    A - T
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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