The detailed information of tRNA gene sequence


Sequence ID>WENV170688865
Genome IDLFRM01265574
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2138
End posion on genome 2053
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atattcctac
tRNA gene sequence 
GGAGAGGTGACCGAGTGGTTTAAGGTGCACGCCTGGAACGCGTGTGTACGCAAGTACCGT
GAGTTCGAATCTCACCTTCTCCGCCA
Downstream region at tRNA end position 
tacataaaaa
Secondary structure (Cloverleaf model)
>WENV170688865	Ser	GGA
                   c      GCCA tacataaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G C C A       G T G A G     C
    G         | | |                 T T
    T       A G G T
      T T A        G     TGTACGCAAGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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