The detailed information of tRNA gene sequence


Sequence ID>WENV170688886
Genome IDLFRM01266303
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 7269
End posion on genome 7344
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gttcgacttt
tRNA gene sequence 
GGGGTTTTAGCTCAGTTGGGAGAGCGCTTGAATGGCATTCAAGAGGTCAGGGGTTCGAAT
CCCCTAAGCTCCACCA
Downstream region at tRNA end position 
gaatatacta
Secondary structure (Cloverleaf model)
>WENV170688886	Ala	GGC
                   t      ACCA gaatatacta
                     G - C
                     G - C
                     G + T
                     G - C
                     T + G
                     T - A
                     T - A          T A
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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