The detailed information of tRNA gene sequence


Sequence ID>WENV170688892
Genome IDLFRM01266778
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1318
End posion on genome 1226
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcataattgG
tRNA gene sequence 
GGAAGGGTGCTTGAGTGGCCGAAAAGAGCCGCCTGCTAAGCGGTTGAGGGTGTTAAAGCC
CTCCGAGGGTTCAAATCCCTCCCCTTCCGCCA
Downstream region at tRNA end position 
tttatataaa
Secondary structure (Cloverleaf model)
>WENV170688892	Ser	GCT
                   G      GCCA tttatataaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G T T C       G A G G G     C
    G         | | |                 T T
    C       A A A G
      C G A        A     TGAGGGTGTTAAAGCCCTCC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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