The detailed information of tRNA gene sequence


Sequence ID>WENV170688894
Genome IDLFRM01266821
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 4794
End posion on genome 4708
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
caacgttcaa
tRNA gene sequence 
GCGGAAATGGCGGAATTGGCAGACGCGCTAGCTTCAGGTGCTAGTGATCGCAAGATCGTG
CAGGTTCAAGTCCTGTTTTCCGCACCA
Downstream region at tRNA end position 
caagcccgta
Secondary structure (Cloverleaf model)
>WENV170688894	Leu	CAG
                   a      ACCA caagcccgta
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T          T G
                    T     T G T C C     A
      T A A        G      + | | | |     A
    T       G G C G       G C A G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGATCGCAAGATCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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