The detailed information of tRNA gene sequence


Sequence ID>WENV170688916
Genome IDLFRM01268340
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1383
End posion on genome 1455
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aaaaatacat
tRNA gene sequence 
GGCCTATTCGTCTATCGGCTAGGACGCAAGATTTTCATTCTTGAAAGAGGGGTTCGACTC
CCCTATAGGCTACtc
Downstream region at tRNA end position 
gaacttaata
Secondary structure (Cloverleaf model)
>WENV170688916	Glu	TTC
                   t      ACtc gaacttaata
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T
                     T - A          T C
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      T A          G     AAAG
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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