The detailed information of tRNA gene sequence


Sequence ID>WENV170688942
Genome IDLFRM01269083
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 12212
End posion on genome 12137
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
cttgtttcgt
tRNA gene sequence 
TCCTCAATAGCTCAGTTGGTAGAGCATGCGGCTGTTAACCGCAGGGTCGTAGGTTCGAGT
CCTACTTGAGGAGCCA
Downstream region at tRNA end position 
ttcgggcctt
Secondary structure (Cloverleaf model)
>WENV170688942	Asn	GTT
                   t      GCCA ttcgggcctt
                     T - A
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T
                     A - T          T G
                    T     C A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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