The detailed information of tRNA gene sequence


Sequence ID>WENV170688949
Genome IDLFRM01269401
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2890
End posion on genome 2980
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gttctttcgc
tRNA gene sequence 
GGTGGCGTGTCCGAGCGGCCGAAGGTGCTCGCCTCGAAAGCGAGTGTTGGGTAACCCCCA
ACCGAGGGTTCAAATCCCTCCGCCACCGCCA
Downstream region at tRNA end position 
atgatccccc
Secondary structure (Cloverleaf model)
>WENV170688949	Ser	CGA
                   c      GCCA atgatccccc
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G A G G G     C
    G         | |                   T T
    C       A G G T
      C G A        G     TGTTGGGTAACCCCCAACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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