The detailed information of tRNA gene sequence


Sequence ID>WENV170688955
Genome IDLFRM01269821
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 742
End posion on genome 666
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cactttttgt
tRNA gene sequence 
GCCTCAGTGGCTTAGCCCGGCATAGCGGCTGATTTGTAATCAGCAGGTCGCGAGTTCAAT
TCTCGCCTGAGGCTTCA
Downstream region at tRNA end position 
tgagatgcgg
Secondary structure (Cloverleaf model)
>WENV170688955	Thr	TGT
                   t      TTCA tgagatgcgg
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T
                     G - C          T T
                    T     C G C T C     A
      C G A        G      | | | | |     A
    C       T T C G       G C G A G     C
    C         | | |                 T T
    G       T A G C
      G C A        G     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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