The detailed information of tRNA gene sequence


Sequence ID>WENV170688956
Genome IDLFRM01269945
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 21304
End posion on genome 21229
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
aatctttcac
tRNA gene sequence 
GGCCAGGTAGCTCAGTCGGTAGAGCAGAGGATTGAAAATCCTTGTGTCGGCAGTTCGATT
CTGCCCCAGGCCACCA
Downstream region at tRNA end position 
tgaattattg
Secondary structure (Cloverleaf model)
>WENV170688956	Phe	GAA
                   c      ACCA tgaattattg
                     G - C
                     G - C
                     C - G
                     C - G
                     A   A
                     G - C
                     G - C          T T
                    T     C C G T C     A
      T G A        A      | | | | |     G
    C       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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