The detailed information of tRNA gene sequence


Sequence ID>WENV170688957
Genome IDLFRM01269962
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 591
End posion on genome 666
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
atccggtgtt
tRNA gene sequence 
GCCCCAGTAGCTCAGTGGATAGAGCACGGCTCTCCTAAAGCCGGTGTCGGAGGTTCGATT
CCTCTCTGGGGCACCA
Downstream region at tRNA end position 
catgaacggg
Secondary structure (Cloverleaf model)
>WENV170688957	Arg	CCT
                   t      ACCA catgaacggg
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     T C T C C     A
      T G A        A      + | | | |     G
    G       C T C G       G G A G G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     GTGTC
                    C - G
                    G - C
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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