The detailed information of tRNA gene sequence


Sequence ID>WENV170688980
Genome IDLFRM01270403
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 295
End posion on genome 371
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cacgctttcc
tRNA gene sequence 
GGTGATATAGCTCAGTTGGTTAGAGCACAGCACTCATAATGCTGGGGTCGGTGGTTCAAA
TCCACCTATCACCACCA
Downstream region at tRNA end position 
aaaatatata
Secondary structure (Cloverleaf model)
>WENV170688980	Met	CAT
                   c      ACCA aaaatatata
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A
                     A - T          T A
                    T     C C A C C     A
      T G A        A      | | | | |     A
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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