The detailed information of tRNA gene sequence


Sequence ID>WENV170688983
Genome IDLFRM01270745
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 10174
End posion on genome 10100
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ggatgattat
tRNA gene sequence 
GCCGATGTAGCTCAGTTGGTCAGAGCAGCTGATTTGTAATCAGCAGGTCGTGGGTTCGAA
TCCCTCTATCGGCTCgg
Downstream region at tRNA end position 
agttttttga
Secondary structure (Cloverleaf model)
>WENV170688983	Thr	TGT
                   t      TCgg agttttttga
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     G + T          T A
                    T     C T C C C     A
      T G A        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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