The detailed information of tRNA gene sequence


Sequence ID>WENV170688989
Genome IDLFRM01270881
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 10526
End posion on genome 10599
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tcagcaacac
tRNA gene sequence 
GGGCTCATGGTCTAGTGGTTATGACGTCTCCCTCACACGGAGGAGGTCGCCGGTTCGAAT
CCGGCTGAGCCCACtt
Downstream region at tRNA end position 
ctcttttgcc
Secondary structure (Cloverleaf model)
>WENV170688989	Val	CAC
                   c      ACtt ctcttttgcc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T          T A
                    T     C G G C C     A
      T G A        G      | | | | |     G
    G       T C T G       G C C G G     C
    G         | | |                 T T
    T       T G A C
      T A          G     AGGTC
                    T + G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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