The detailed information of tRNA gene sequence


Sequence ID>WENV170688998
Genome IDLFRM01271428
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1955
End posion on genome 1882
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aattgaataa
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGAAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCAAA
TCCTACTCCCGCTAttt
Downstream region at tRNA end position 
tgcccagata
Secondary structure (Cloverleaf model)
>WENV170688998	Met	CAT
                   a      Attt tgcccagata
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C A T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G A A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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